Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948093.1_cds_XP_016489465.1_79983
CDS Infomation

[gene=LOC107809369] [db_xref=GeneID:107809369] [protein=protein DEK-like isoform X2] [protein_id=XP_016489465.1] [location=join(30060..30518,30746..30779,31568..31647,31834..31893,32061..32171,32273..32353,32501..32578,33565..34060,34368..34465,34611..34641,34737..34897)] [gbkey=CDS]
Sequence

ATGGCGTCCGAGAAAGAAACCCTAGAAGATCAGAAACCAGAAGAGGTGACGGAGGAGAAA
TCTTCCTTACAAGAACAAGAAGAAGAGAAAAAGTCAACCGAAGCAGGGGAGGAGGAGAAA
AAAGATGAAAAGCCAGAGATTAAAGCCGAAGATGAGGACGAGAAAGAAGAAGACAAAGAG
GAAGTAGATGAAATGGAAGTAGATAAAAAAGAAGCGGAAGAAGACGAATCAGAGCAGGAG
GAGGAAAAAGAGGAGTCAGAGGAGGAGGAAAAGCAAGAGAAAACACCAGTAAAGAAGGGC
AAAGAGAAAAGTAGTAGCAAAAGTGAGGAAAAAAAGGAGAGTACGGAAGAGCCAGTGACA
CCAAGCTCAAGGCCGACAAGGGAACGGAAAACTGTGGAGCGTTACTCCGAGTCTTCGGGT
GCTAGAAGTTCGACGCCTAAGCCATTGTCAATCAGGAAGGGTAGTGGTACTCAGCTGAAG
GACATCCCAAATGTGGCTTATAAACTATCCAAGAGAAAACATGATGACAACCTGCAGATA
CTACACAATATTCTTTATGGCAAGAAAACAAAGGCACATAGTTTGAAGAAAAACATAGGG
CAGTTTTCAGGATTTGTTTGGGTTGAAGATGAGGAAAAACAAAGGGGGAAAGTCAAAGAG
AGGCTGGACAAGTGTGTTAAGGAGAAGCTACTGGATTTTTGCGATGTCCTCAATATTTCA
GTGATTAAATCTGCTGCAAAGAAGGATGAGCTCATAGTGAAATTATTAGAATTCCTGGAA
TCTCCTCATCCTACAACAGATTCCTTGCTTGCTGATAAGCAACAGGGTAAGAAGCAAAAG
GGGAAGAGCACAGCTGCCAAAAGCACAGGTTCCTCAGATAAAACTACTGGGAAATCAGTA
AAGAAGGATCAGAAATCTGATGTTGGGGTGAAGCGGAAGCGGCCATCAAAAATTGAAGAA
GAAGCTGATGCTGAACCATCAGATACTAGAGATGACTCTGAGAATGACGATGAAGCTGCT
AAAGAAGGAAGTGATCAGGAAGAGACTGCTTCCGAGAAAGATGAGGAACAAGAGGAAGAG
GAAGTGGAAGAGAAACCCAAAGTCAAGTCTCATGAGAAGGTTTATTCAAAGAAGAGTTCA
AAGAAGGATTCTGGAAGTGAAGCTGTAGAGAAGTCTAAGGCTATGGAAAAGGGCAGCCCT
GCTAAGTCTTCGAAAAGCTCATCAAAATCTACCAAAGAGACTTCTAGTTTAGCTTCCAAG
AAAGGTGCTTCTGCTGCTGATTCAATATCTAAACCCAAGAAACAAAAAGTTGAAAAGAAA
AGTAAAAAAGAAGAAACTGAATCTGTGAAGGAAAAATCTTCGGGCAAGAAACAATCAAGC
AAGTCTACTGCAAAGGAAGGAAAAGGGAAAAGTGTGAAGAAGGCCAAAGTAGAGCCCACC
AAAGAAGAATTGCATTCAGTAGTAGCAAATATTCTTCAAGAAGTTGATTTTAACACTGCA
ACTTTATCTGATATTATCAGGAAACTAGGTAGCCACTTTGATGTGGATTTGATGCACAGA
AAAGCAGAGGTGAAGGCAATAATCACTGAAGTAATAAATAACATGAGTGATGAGGAAGAA
GAGGAGGATGAAGCTGAAGGTGGTGATGATGCAGAAAAACATGGAGGAGGCGATGACAGT
GATGCTTGA

Peptide Sequence

PEP ID

XP_016489465.1
PEP Infomation

PREDICTED: protein DEK-like isoform X2 [Nicotiana tabacum]
Sequence

MASEKETLEDQKPEEVTEEKSSLQEQEEEKKSTEAGEEEKKDEKPEIKAEDEDEKEEDKE
EVDEMEVDKKEAEEDESEQEEEKEESEEEEKQEKTPVKKGKEKSSSKSEEKKESTEEPVT
PSSRPTRERKTVERYSESSGARSSTPKPLSIRKGSGTQLKDIPNVAYKLSKRKHDDNLQI
LHNILYGKKTKAHSLKKNIGQFSGFVWVEDEEKQRGKVKERLDKCVKEKLLDFCDVLNIS
VIKSAAKKDELIVKLLEFLESPHPTTDSLLADKQQGKKQKGKSTAAKSTGSSDKTTGKSV
KKDQKSDVGVKRKRPSKIEEEADAEPSDTRDDSENDDEAAKEGSDQEETASEKDEEQEEE
EVEEKPKVKSHEKVYSKKSSKKDSGSEAVEKSKAMEKGSPAKSSKSSSKSTKETSSLASK
KGASAADSISKPKKQKVEKKSKKEETESVKEKSSGKKQSSKSTAKEGKGKSVKKAKVEPT
KEELHSVVANILQEVDFNTATLSDIIRKLGSHFDVDLMHRKAEVKAIITEVINNMSDEEE
EEDEAEGGDDAEKHGGGDDSDA

Transcript Sequence

Gene sequence data has not been registered.